It's vital to reform rural culture system. In the paper, the hierarchical structure of Organization Culture in management science is inspired firstly to establish the framework of rural culture system which includes ecological culture, material culture, institutional culture, behavioral culture and spiritual culture. On the basis of the framework above, it's analyzed deeply that traditional rural culture has effects on the social transition. Aimed at the problems, the strategy of reestablishing rural culture system on the background of social transition is advanced so that the reasonable guide for evolution of rural culture can be inspired correspondingly.